bed12_to_exons: Convert BED12 to individual exons in BED6.
In valr: Genome Interval Arithmetic
View source: R/bed12_to_exons.r
bed12_to_exons R Documentation
Convert BED12 to individual exons in BED6.
Description
After conversion to BED6 format, the score column contains the exon
number, with respect to strand (i.e., the first exon for - strand
genes will have larger start and end coordinates).
Usage
bed12_to_exons(x)
Arguments
x
ivl_df
See Also
Other utilities:
bed_makewindows(),
bound_intervals(),
flip_strands(),
interval_spacing()
Examples
x <- read_bed12(valr_example("mm9.refGene.bed.gz"))
bed12_to_exons(x)
valr documentation built on Sept. 19, 2023, 1:07 a.m.
R Package Documentation
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Note that we can't provide technical support on individual packages. You should contact the package authors for that.
View source: R/bed12_to_exons.r
| bed12_to_exons | R Documentation |
Convert BED12 to individual exons in BED6.
Description
After conversion to BED6 format, the score column contains the exon
number, with respect to strand (i.e., the first exon for - strand
genes will have larger start and end coordinates).
Usage
bed12_to_exons(x)
Arguments
x |
ivl_df |
See Also
Other utilities:
bed_makewindows(),
bound_intervals(),
flip_strands(),
interval_spacing()
Examples
x <- read_bed12(valr_example("mm9.refGene.bed.gz"))
bed12_to_exons(x)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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