create_introns: Create intron features.
In valr: Genome Interval Arithmetic
create_introns R Documentation
Create intron features.
Description
Numbers in the score column are intron numbers from 5' to 3' independent of
strand. I.e., the first introns for + and - strand genes both have score
values of 1.
Usage
create_introns(x)
Arguments
x
ivl_df in BED12 format
See Also
Other feature functions:
create_tss(),
create_utrs3(),
create_utrs5()
Examples
x <- read_bed12(valr_example("mm9.refGene.bed.gz"))
create_introns(x)
valr documentation built on Sept. 19, 2023, 1:07 a.m.
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| create_introns | R Documentation |
Create intron features.
Description
Numbers in the score column are intron numbers from 5' to 3' independent of
strand. I.e., the first introns for + and - strand genes both have score
values of 1.
Usage
create_introns(x)
Arguments
x |
ivl_df in BED12 format |
See Also
Other feature functions:
create_tss(),
create_utrs3(),
create_utrs5()
Examples
x <- read_bed12(valr_example("mm9.refGene.bed.gz"))
create_introns(x)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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