gitDataUrl: Convert ulr-name for reading in raw-mode

In wrMisc: Analyze Experimental High-Throughput (Omics) Data

Convert ulr-name for reading in raw-mode

Description

This functions converts a given urlName so that from data from git-hub can be read correctly that tabular data. Thus, this will remove '/blob/' and change starting characters to 'raw.githubusercontent.com'

Usage

gitDataUrl(
  urlName,
  replTxt = NULL,
  silent = FALSE,
  debug = FALSE,
  callFrom = NULL
)

Arguments

urlName	(charachter) main url-address
replTxt	(NULL or matrix) adjust/ custom-modify search- and replacement items; should be matrix with 2 columns, the 1st colimn entries will be used as 'search-for' and the 2nd as 'replace by' fro each row.
silent	(logical) suppress messages
debug	(logical) additional messages for debugging
callFrom	(character) allow easier tracking of messages produced

Value

corrected urlName

See Also

sub;

Examples

url1 <- paste0("https://github.com/bigbio/proteomics-metadata-standard/blob/",
  "master/annotated-projects/PXD001819/PXD001819.sdrf.tsv") 
gitDataUrl(url1)

wrMisc documentation built on Sept. 11, 2024, 6:10 p.m.