xpose.plot.bw | R Documentation |
This is a wrapper function for the lattice bwplot
function.
xpose.plot.bw( x, y, object, inclZeroWRES = FALSE, onlyfirst = FALSE, samp = NULL, panel = xpose.panel.bw, groups = NULL, ids = FALSE, logy = FALSE, logx = FALSE, aspect = object@Prefs@Graph.prefs$aspect, funy = NULL, funx = NULL, PI = FALSE, by = object@Prefs@Graph.prefs$condvar, force.by.factor = FALSE, ordby = object@Prefs@Graph.prefs$ordby, byordfun = object@Prefs@Graph.prefs$byordfun, shingnum = object@Prefs@Graph.prefs$shingnum, shingol = object@Prefs@Graph.prefs$shingol, strip = function(...) strip.default(..., strip.names = c(TRUE, TRUE)), subset = xsubset(object), main = xpose.create.title(x, y, object, subset, funx, funy, ...), xlb = xpose.create.label(x, object, funx, logx, ...), ylb = xpose.create.label(y, object, funy, logy, ...), scales = list(), suline = object@Prefs@Graph.prefs$suline, binvar = NULL, bins = 10, mirror = FALSE, max.plots.per.page = 4, mirror.aspect = "fill", pass.plot.list = FALSE, x.cex = NULL, y.cex = NULL, main.cex = NULL, mirror.internal = list(strip.missing = missing(strip)), ... )
x |
Name(s) of the x-variable. |
y |
Name(s) of the y-variable. |
object |
An xpose.data object. |
inclZeroWRES |
A logical value indicating whether rows with WRES=0 should be plotted. |
onlyfirst |
A logical value indicating whether only the first row per individual should be included in the plot. |
samp |
An integer between 1 and object@Nsim
(see |
panel |
The name of the panel function to use. This should in most
cases be left as |
groups |
A string with the name of any grouping variable (used as the
groups argument to |
ids |
A logical value indicating whether text labels should be used as
plotting symbols (the variable used for these symbols indicated by the
|
logy |
Logical value indicating whether the y-axis should be logarithmic. |
logx |
Logical value indicating whether the x-axis should be logarithmic. |
aspect |
The aspect ratio of the display (see
|
funy |
String with the name of a function to apply to the y-variable before plotting, e.g. "abs". |
funx |
String with the name of a function to apply to the x-variable before plotting, e.g. "abs". |
PI |
Either "lines", "area" or "both" specifying whether prediction
intervals (as lines, as a shaded area or both) should be computed from the
data in |
by |
A string or a vector of strings with the name(s) of the conditioning variables. |
force.by.factor |
Logical value. If TRUE, and |
ordby |
A string with the name of a variable to be used to reorder any
factor conditioning variables ( |
byordfun |
The name of the function to be used when reordering a factor
conditioning variable (see argument |
shingnum |
The number of shingles ("parts") a continuous conditioning variable should be divided into. |
shingol |
The amount of overlap between adjacent shingles (see argument
|
strip |
The name of the function to be used as the strip argument to
the |
subset |
A string giving the subset expression to be applied to the
data before plotting. See |
main |
A string giving the plot title or |
xlb |
A string giving the label for the x-axis. |
ylb |
A string giving the label for the y-axis. |
scales |
A list to be used for the |
suline |
A string giving the variable to be used to construct a smooth
to superpose on the display. |
binvar |
Variable to be used for binning. |
bins |
The number of bins to be used. The default is 10. |
mirror |
Should we create mirror plots from simulation data? Value can
be |
max.plots.per.page |
The maximum number of plots per page that can be created with the mirror plots. |
mirror.aspect |
The aspect ratio of the plots used for mirror functionality. |
pass.plot.list |
Should we pass the list of plots created with mirror
or should we print them directly. Values can be |
x.cex |
The size of the x-axis label. |
y.cex |
The size of the y-axis label. |
main.cex |
The size of the title. |
mirror.internal |
an internal mirror argument used in
|
... |
Other arguments passed to |
E. Niclas Jonsson, Mats Karlsson, Andrew Hooker & Justin Wilkins
xpose.data-class
, Cross-references above.
## Not run: ## xpdb5 is an Xpose data object ## We expect to find the required NONMEM run and table files for run ## 5 in the current working directory xpdb5 <- xpose.data(5) ## Box & whisker plot of WRES vs PRED xpose.plot.bw("WRES", "PRED", xpdb5, binvar="PRED") ## End(Not run)
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