API for AdrijaK/omicsWrappers
wrapper functions for integrating and visualising ChIPseq, ATACseq, Hi-C, pcHi-C and RNAseq data
| Global functions | |
|---|---|
| CandidateInteractionsToGInteractions | Man page Source code |
| chicDiffToGI | Man page Source code |
| countChIPPeaksInPromoters | Man page Source code |
| countFeatureSet | Man page Source code |
| countReadsInGranges | Man page Source code |
| findGOTerms | Man page Source code |
| findMouseGenesFromGO | Man page Source code |
| loadBed6AsGRanges | Man page Source code |
| loadFilteredResultsAsGRanges | Man page Source code |
| makeFeaturesList | Man page Source code |
| plotFeatureOverlaps | Man page Source code |
| plotOverlapsWithFeaturesList | Man page Source code |
| removeAllAfterDot | Man page Source code |
| summarizeOverlapsWithFeatureList | Man page Source code |
| writeGRanges2BED | Man page Source code |
