loadBed6AsGRanges: load snakePipes DiffBinding_allregions.bed BED6 file as...
In AdrijaK/omicsWrappers: wrapper functions for integrating and visualising ChIPseq, ATACseq, Hi-C, pcHi-C and RNAseq data
View source: R/loadBed6AsGRanges.R
Description
load snakePipes DiffBinding_allregions.bed BED6 file as GRanges object, giving appropriate column names
note that BED is a 0-based format, while GRanges is 1-based format
This means that the start coordinate should be converted to +1 when converting from BED to GRanges
Usage
1
loadBed6AsGRanges(pathToFile)
Arguments
pathToFile
(string) an absolute or relative path to a bed file
AdrijaK/omicsWrappers documentation built on July 22, 2020, 2:11 p.m.
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View source: R/loadBed6AsGRanges.R
Description
load snakePipes DiffBinding_allregions.bed BED6 file as GRanges object, giving appropriate column names note that BED is a 0-based format, while GRanges is 1-based format This means that the start coordinate should be converted to +1 when converting from BED to GRanges
Usage
1 | loadBed6AsGRanges(pathToFile)
|
Arguments
pathToFile |
(string) an absolute or relative path to a bed file |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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