dot-DrawFdrEst: DrawFdrEst Function (FDREst)
In AlexisHardy/DNAModAnnot: Toolbox for DNA Modifications filtering and annotation

.DrawFdrEst

R Documentation

DrawFdrEst Function (FDREst)

Return a plot describing the false discovery rate estimations by threshold on the parameter provided for the dataframe provided.

.DrawFdrEst(
  dFdr,
  cNameParamToTest,
  nFdrPropForFilt,
  cMotifFg = NULL,
  lAdjustFdr = TRUE
)

`dFdr`	A dataframe with 3 columns: fdr: The false discovery rate estimated for this threshold. threshold: The threshold on the parameter. fdr_cummin: The minimum false discovery rate estimated for this threshold and less stringent thresholds (adjusted false discovery rate).
`cNameParamToTest`	The name of the column containing the parameter to be tested.
`nFdrPropForFilt`	A number indicating the false discovery rate to be used for filtering: this will allow to choose the closest threshold below this number and represent it on the plot. Defaults to 0.05 (so fdr of 5%).
`cMotifFg`	The name of the motif tested. If NULL, the title will display "(Sample vs Control)" instead. Defaults to NULL.
`lAdjustFdr`	If TRUE, display fdr_cummin (adjusted false discovery rate) instead of fdr column. Defaults to TRUE.