dot-ExportBamForGviz: .ExportBamForGviz Function (ModAnnot)
In AlexisHardy/DNAModAnnot: Toolbox for DNA Modifications filtering and annotation
.ExportBamForGviz R Documentation
.ExportBamForGviz Function (ModAnnot)
Description
Subfunction to export a GRanges object as a bam file.
Usage
.ExportBamForGviz(
cFileName,
grangesObject,
cBamXaParameter,
dnastringsetGenome
)
Arguments
cFileName
Name of the file to be exported.
grangesObject
A GRanges object to be exported.
cBamXaParameter
The name of the parameter to be exported as a "Xa" optional field within the bam file.
dnastringsetGenome
A DNAStringSet object containing the sequence for each contig.
AlexisHardy/DNAModAnnot documentation built on Feb. 27, 2023, 12:03 a.m.
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| .ExportBamForGviz | R Documentation |
.ExportBamForGviz Function (ModAnnot)
Description
Subfunction to export a GRanges object as a bam file.
Usage
.ExportBamForGviz( cFileName, grangesObject, cBamXaParameter, dnastringsetGenome )
Arguments
cFileName |
Name of the file to be exported. |
grangesObject |
A GRanges object to be exported. |
cBamXaParameter |
The name of the parameter to be exported as a "Xa" optional field within the bam file. |
dnastringsetGenome |
A DNAStringSet object containing the sequence for each contig. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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