mash_plot_Ulist: ggplot of specific covariance matrix patterns

In Alice-MacQueen/switchgrassGWAS: Genome Wide Association on Panicum virgatum

Description

Creates a tile plot using ggplot of the covariance matrices specified in the mash model.

Usage

mash_plot_Ulist(m, range = NA, saveoutput = FALSE, suffix = "", limits = TRUE)

Arguments

m	An object of type mash
range	Numeric vector. Which covariance matrices should be plotted?
saveoutput	Logical. Should the output be saved to the path?
suffix	Character. Optional. A unique suffix used to save the files, instead of the current date & time.
limits	should there be plot limits of -1 and 1? Default is true.

Value

A list of dataframes used to make the tile plots and the plots themselves.

Alice-MacQueen/switchgrassGWAS documentation built on Jan. 23, 2022, 7:55 p.m.