pvdiv_top_effects_log10p: Step One of bigsnp2mashr
In Alice-MacQueen/switchgrassGWAS: Genome Wide Association on Panicum virgatum
View source: R/pvdiv_bigsnp2mashr.R
Description
Step One of bigsnp2mashr
Usage
1
pvdiv_top_effects_log10p(path, gwas_rds, phenotype, numSNPs, markers)
Arguments
path
Path
gwas_rds
RDS file with gwas results
phenotype
Character vector. Single phenotype name
numSNPs
Integer. Number of top SNPs to choose.
markers
Marker CHR & POS for the GWAS you ran
Alice-MacQueen/switchgrassGWAS documentation built on Jan. 23, 2022, 7:55 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
View source: R/pvdiv_bigsnp2mashr.R
Description
Step One of bigsnp2mashr
Usage
1 | pvdiv_top_effects_log10p(path, gwas_rds, phenotype, numSNPs, markers)
|
Arguments
path |
Path |
gwas_rds |
RDS file with gwas results |
phenotype |
Character vector. Single phenotype name |
numSNPs |
Integer. Number of top SNPs to choose. |
markers |
Marker CHR & POS for the GWAS you ran |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.