gene_dispersion: Compute dispersion for each gene in a gene x sample matrix

In AllenInstitute/scrattch.hicat: Hierarchical Iterative Clustering Analysis for Transcriptomic data

Compute dispersion for each gene in a gene x sample matrix

Description

Compute dispersion for each gene in a gene x sample matrix

Usage

gene_dispersion(dat, means = NULL, vars = NULL, rescale = FALSE)

Arguments

dat	a matrix or dg[CT]Matrix of expression values with genes as rows and samples as columns.
means	(optional) a vector of means for each gene/row. If NULL (default), will be computed using gene_means().
vars	(optional) a vector of variances for each gene/row. If NULL (default), will be computed using gene_vars().
rescale	a logical indicating whether or not to rescale using rescale_samples(). Default is FALSE.

Value

a numeric vector of dispersion values for each gene

AllenInstitute/scrattch.hicat documentation built on June 6, 2024, 5:31 a.m.