get_cl_prop: Compute cluster proportions for each row in a matrix
In AllenInstitute/scrattch.hicat: Hierarchical Iterative Clustering Analysis for Transcriptomic data
get_cl_prop R Documentation
Compute cluster proportions for each row in a matrix
Description
Compute cluster proportions for each row in a matrix
Usage
get_cl_prop(mat, cl, threshold = 1)
Arguments
mat
a gene (rows) x samples(columns) sparse matrix
cl
A cluster factor object
threshold
The minimum expression value used to binarize the results
Value
a matrix of genes (rows) x cluster(columns) with proportions for each cluster
AllenInstitute/scrattch.hicat documentation built on June 6, 2024, 5:31 a.m.
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| get_cl_prop | R Documentation |
Compute cluster proportions for each row in a matrix
Description
Compute cluster proportions for each row in a matrix
Usage
get_cl_prop(mat, cl, threshold = 1)
Arguments
mat |
a gene (rows) x samples(columns) sparse matrix |
cl |
A cluster factor object |
threshold |
The minimum expression value used to binarize the results |
Value
a matrix of genes (rows) x cluster(columns) with proportions for each cluster
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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