predict_annotate_cor | R Documentation |
This function performs map_by_cor(), then compare_annotate().
predict_annotate_cor(
cl,
norm.dat,
ref.markers,
ref.cl,
ref.cl.df,
ref.norm.dat,
method = "median",
reorder = TRUE
)
cl |
a cluster factor object for data to map to the reference |
norm.dat |
a normalized data matrix for data to map to the reference |
ref.markers |
a set of reference marker genes |
ref.cl |
a reference cluster factor object |
ref.cl.df |
a reference cl.df data.frame that describes the reference clusters |
ref.norm.dat |
a reference normalized data matrix |
method |
"median" or "mean". Default is "median". |
reorder |
Whether or not to reorder the input clusters based on the reference. |
a list object with annotation results
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