sample_cells: Downsample cells from each cluster

In AllenInstitute/scrattch.hicat: Hierarchical Iterative Clustering Analysis for Transcriptomic data

Downsample cells from each cluster

Description

Downsample cells from each cluster

Usage

sample_cells(cl, sample.size, weights = NULL, seed = NULL)

Arguments

cl	A cluster factor object
sample.size	A maximum number of cells to take from each cluster, or a named numeric object with the number of cells to be sampled and names matching cluster levels
weights	A named numeric vector with weights for each cell, passed to the prob parameter of the sample() function. Default is NULL.
seed	A seed value for random sampling. If NULL (default), will be randomized.

Value

A cluster factor object containing sampled cells

AllenInstitute/scrattch.hicat documentation built on June 6, 2024, 5:31 a.m.