sequences_write: Write sequences to file
In AntonelliLab/gaius: Divide and Conquer Phylogenetic Supermatrices and Supertrees in R
Description
Usage
Arguments
Value
Description
Takes a sequence-based object and writes the sequences to file
in .FASTA format. For objects with multiple sequence groups, "supermatrices"
and "alignment_list", the flpth should point to a directory not a
file. Files are then created in this directory based on the group name for
each sequence group.
Usage
1
sequences_write(x, flpth, width = 80)
Arguments
x
sequences as "supermatrix", "supermatrices", "alignment" or
"alignment_list" objects.
flpth
File path to output file or folder. Character.
width
Max number of base pairs per line, default 80. Integer.
Value
Logical
AntonelliLab/gaius documentation built on June 17, 2020, 8:07 a.m.
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Description Usage Arguments Value
Description
Takes a sequence-based object and writes the sequences to file
in .FASTA format. For objects with multiple sequence groups, "supermatrices"
and "alignment_list", the flpth should point to a directory not a
file. Files are then created in this directory based on the group name for
each sequence group.
Usage
1 | sequences_write(x, flpth, width = 80)
|
Arguments
x |
sequences as "supermatrix", "supermatrices", "alignment" or "alignment_list" objects. |
flpth |
File path to output file or folder. Character. |
width |
Max number of base pairs per line, default 80. Integer. |
Value
Logical
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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