alignment_read: Read in sequence alignment(s)
In AntonelliLab/gaius: Divide and Conquer Phylogenetic Supermatrices and Supertrees in R
Description
Usage
Arguments
Details
Value
See Also
Description
Return alignment list object from reading in sequences from
alignment file(s). Use format to specify alignment file type. If no
format given, the function will guess based on file extension.
Usage
1
2
alignment_read(flpths, format = c("guess", "clustal", "msf", "mase",
"phylip", "fasta"))
Arguments
flpths
File path(s) to alignment file(s)
format
Sequnece file format. Default 'guess'. Character.
Details
Available file formats: "clustal", "msf", "mase", "phylip" and
"fasta".
Value
alignment list
See Also
AntonelliLab/gaius documentation built on June 17, 2020, 8:07 a.m.
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Description Usage Arguments Details Value See Also
Description
Return alignment list object from reading in sequences from
alignment file(s). Use format to specify alignment file type. If no
format given, the function will guess based on file extension.
Usage
1 2 | alignment_read(flpths, format = c("guess", "clustal", "msf", "mase",
"phylip", "fasta"))
|
Arguments
flpths |
File path(s) to alignment file(s) |
format |
Sequnece file format. Default 'guess'. Character. |
Details
Available file formats: "clustal", "msf", "mase", "phylip" and "fasta".
Value
alignment list
See Also
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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