Man pages for AntonioDeFalco/SCEVAN
SCEVAN

annotateGenesannotateGenes Annotate genes with genomic coordinates with...
classifyClusterclassifyCluster Classify the two major clusters of CNA matrix...
classifyTumorCellsclassifyTumorCells Classify tumour and normal cells from the...
computeCNAmtxcomputeCNAmtx computed the CNA matrix using the break points...
getConfidentNormalCellsgetConfidentNormalCells Get at most top 30 confident normal...
pipelineCNApipelineCNA Executes the entire SCEVAN pipeline that...
removeSyntheticBaselineremoveSyntheticBaseline Removes a synthetic baseline from a...
sortDataThis function sorts a dataset file by the genomic position of...
subclonesTumorCellssubclonesTumorCells Check the presence of subclonal...
top30classificationGet at most top 30 confident normal cells
AntonioDeFalco/SCEVAN documentation built on June 23, 2022, 11:08 a.m.