getConfidentNormalCells: getConfidentNormalCells Get at most top 30 confident normal...

In AntonioDeFalco/SCEVAN: SCEVAN

getConfidentNormalCells Get at most top 30 confident normal cells from count matrix.

Description

getConfidentNormalCells Get at most top 30 confident normal cells from count matrix.

Usage

getConfidentNormalCells(
  mtx,
  sample = "",
  par_cores = 20,
  AdditionalGeneSets = NULL,
  SCEVANsignatures = TRUE,
  organism = "human"
)

Arguments

mtx	count matrix
sample	sample name (optional)
par_cores	number of cores (default 20)
AdditionalGeneSets	list of additional signatures of normal cell types (optional)
SCEVANsignatures	FALSE if you only want to use only the signatures specified in AdditionalGeneSets (default TRUE)

AntonioDeFalco/SCEVAN documentation built on Oct. 26, 2023, 10:48 a.m.