getBreaksVegaMC: getBreaksVegaMC Get SCEVAN segmentation of the matrix.
In AntonioDeFalco/SCEVAN: SCEVAN
getBreaksVegaMC R Documentation
getBreaksVegaMC Get SCEVAN segmentation of the matrix.
Description
getBreaksVegaMC Get SCEVAN segmentation of the matrix.
Usage
getBreaksVegaMC(mtx, chr_vect, sample = "", beta_vega = 0.5)
Arguments
mtx
count matrix
chr_vect
Vector specifying for each gene the chromosome where it is located
sample
sample name (optional)
beta_vega
specifies beta parameter for segmentation, higher beta for more coarse-grained segmentation. (default 0.5)
Value
breakpoints
AntonioDeFalco/SCEVAN documentation built on April 14, 2025, 6:33 a.m.
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| getBreaksVegaMC | R Documentation |
getBreaksVegaMC Get SCEVAN segmentation of the matrix.
Description
getBreaksVegaMC Get SCEVAN segmentation of the matrix.
Usage
getBreaksVegaMC(mtx, chr_vect, sample = "", beta_vega = 0.5)
Arguments
mtx |
count matrix |
chr_vect |
Vector specifying for each gene the chromosome where it is located |
sample |
sample name (optional) |
beta_vega |
specifies beta parameter for segmentation, higher beta for more coarse-grained segmentation. (default 0.5) |
Value
breakpoints
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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