clin_collab_df: An example data set for an IMPACT analysis coming from a...
In AxelitoMartin/gnomeR: Wrangle and analyze IMPACT and TCGA mutation data
clin_collab_df R Documentation
An example data set for an IMPACT analysis coming from a clinical collaborator
Description
This set was created from a sample of 20 patients from
publicly available prostate cancer data from cBioPortal (study_id = "gbc_mskcc_2022").
Usage
clin_collab_df
Format
A data frame with copy number alterations (CNA) retrieved from cBioPortal.
cbioportal_idcharacter with IMPACT sample ID
ctypecharacter cancer type
primary_metscharacter with sample type
AxelitoMartin/gnomeR documentation built on March 23, 2024, 3:07 a.m.
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| clin_collab_df | R Documentation |
An example data set for an IMPACT analysis coming from a clinical collaborator
Description
This set was created from a sample of 20 patients from
publicly available prostate cancer data from cBioPortal (study_id = "gbc_mskcc_2022").
Usage
clin_collab_df
Format
A data frame with copy number alterations (CNA) retrieved from cBioPortal.
cbioportal_idcharacter with IMPACT sample ID
ctypecharacter cancer type
primary_metscharacter with sample type
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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