API for AxelitoMartin/gnomeR
Wrangle and analyze IMPACT and TCGA mutation data

Global functions
%>% Man page
.cna_gene_binary Man page
.fusions_gene_binary Man page
.mutations_gene_binary Man page
.sum_alts_in_pathway Man page
CNregions.mod Man page
add.perc Man page Source code
add_pathways Man page Source code
annotate_any_panel Man page Source code
annotate_specific_panel Man page Source code
check_cna_input Man page Source code
check_fusion_input Man page Source code
check_mutation_input Man page Source code
clin.patients Man page
clin.sample Man page
cna Man page
create_gene_binary Man page Source code
curated_genes Man page
dat_oncoprint Man page Source code
facets_dat Man page
facets_heatmap Man page
fusion Man page
gene_panels Man page
genie_gene_info Man page
ggcomut Man page Source code
gggenecor Man page Source code
ggheatmap Man page Source code
ggsamplevar Man page Source code
ggsnvclass Man page Source code
ggtopgenes Man page Source code
ggvarclass Man page Source code
ggvartype Man page Source code
gnomeR Man page
gnomeR-package Man page
gnomer_colors Man page
gnomer_cols Man page Source code
gnomer_pal Man page Source code
gnomer_palette Man page Source code
gnomer_palettes Man page
impact_gene_info Man page
mut Man page
mutation_viz Man page Source code
oncokb Man page Source code
panel_names Man page
pathways Man page
plot_oncoprint Man page Source code
print.palette Source code
recode_alias Man page Source code
reformat_cna Man page Source code
resolve_alias Man page Source code
scale_color_pancan Man page Source code
scale_fill_pancan Man page Source code
seg Man page
specify_impact_panels Man page Source code
substrRight Man page Source code
summarize_by_gene Man page Source code
tbl_genomic Man page Source code
tcga_genes Man page
tcga_samples Man page
ti_341 Man page
ti_410 Man page
ti_468 Man page
AxelitoMartin/gnomeR documentation built on April 21, 2022, 3:01 p.m.