mutations | R Documentation |
This set contains a random sample of 200 patients from publicly available prostate cancer data from cBioPortal. The file is in API format.
mutations
A data frame with mutations from Abida et al. JCO Precis Oncol 2017. Retrieved from cBioPortal.There are 725 observations and 29 variables.
Character w/ 324 levels, Column containing all HUGO symbols genes
Entrez Gene ID
MSKCC Sample ID
Patient ID
Indicator for Abida et al. 2017 study
Cancer Center ID
Somatic or germ-line mutation status
Mutation variant type
Chromosome mutation observed on
End Position
fisValue
functionalImpactScore
keyword
linkMsa
linkPdb
linkXvar
molecularProfileId
mutationType
ncbiBuild
proteinChange
proteinPosEnd
proteinPosStart
referenceAllele
refseqMrnaId
startPosition
uniquePatientKey
uniqueSampleKey
validationStatus
variantAllele
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