Man pages for BIGslu/kimma
Kinship In Mixed Model Analysis of RNA-seq
| example.count | kimma example count table. |
| example.dat | kimma example DGEList. |
| example.kin | kimma example kinship. |
| example.seasnake | Example SEAsnake outputs |
| example.voom | kimma example EList. |
| extract_lmFit | Extract lmFit model results |
| kimma_cleaning | kmFit data cleaning |
| kimma_lm | Run kimma linear model |
| kimma_lme | Run kimma linear mixed effects model |
| kimma_lmerel | Run kimma linear mixed effects model with kinship |
| kmFit | Linear mixed effects models with kinship for RNA-seq |
| kmFit_contrast | Run pairwise model comparisons with emmeans |
| kmFit_eQTL | eQTL linear mixed effects models with kinship |
| pipe | Pipe operator |
| summarise_kmFit | Summarise kmFit FDR results |
