kimma_lme: Run kimma linear mixed effects model

In BIGslu/kimma: Kinship In Mixed Model Analysis of RNA-seq

Run kimma linear mixed effects model

Description

Run kimma linear mixed effects model

Usage

kimma_lme(model_lme, to_model_gene, gene, use_weights, metrics)

Arguments

model_lme	Character model created in kmFit
to_model_gene	Data frame formatted in kmFit, subset to gene of interest
gene	Character of gene to model
use_weights	Logical if gene specific weights should be used in model. Default is FALSE
metrics	Logical if should calculate model fit metrics such as AIC, BIC, R-squared. Default is FALSE

Value

Linear mixed effect results data frame for 1 gene

BIGslu/kimma documentation built on May 30, 2024, 10:09 p.m.