as.genes.in.patterns: as.genes.in.patterns

In BIMIB-DISCo/TRONCO: TRONCO, an R package for TRanslational ONCOlogy

as.genes.in.patterns

Description

Return the list of genes present in selected patterns

Usage

as.genes.in.patterns(x, patterns = NULL)

Arguments

x	A TRONCO compliant dataset.
patterns	A list of patterns for which the list will be returned

Value

A list of genes present in patterns which consitute CAPRI's hypotheses

Examples

data(test_dataset)
as.genes.in.patterns(test_dataset)
as.genes.in.patterns(test_dataset, patterns='XOR_EZH2')

BIMIB-DISCo/TRONCO documentation built on May 7, 2024, 8:13 p.m.