getSimilarity: get similarity for base methylation profiles in an amplicon

Description Usage Arguments

Description

The function returns different metrics for methylation profile similarity for bases in an amplicon

Usage

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getSimilarity(x,sampleName,ampliconName,method="basic")

## S4 method for signature 'AmpliconViews,character,character'
getSimilarity(x, sampleName,
  ampliconName, method)

Arguments

x

an AmpliconViews object

sampleName

name of the sample

ampliconName

name of the amplicon


BIMSBbioinfo/AmpliconBiSeq documentation built on May 5, 2019, 10:25 a.m.