API for BUStools/BUSpaRse
kallisto | bustools R utilities
| Global functions | |
|---|---|
| .annots_from_fa | Source code |
| .get_velocity_files | Man page Source code |
| EC2gene | Man page Source code |
| EC2gene_export | Source code |
| annot_circular | Man page Source code |
| annots_from_fa_GRanges | Man page Source code |
| annots_from_fa_df | Man page Source code |
| cellranger_biotypes | Man page |
| check_char1 | Man page Source code |
| check_genome | Man page Source code |
| check_genome_present | Source code |
| check_gff | Man page Source code |
| check_out_path | Source code |
| check_tag_present | Man page Source code |
| check_tx | Man page Source code |
| dl_transcriptome | Man page Source code |
| ensembl_gene_biotypes | Man page |
| ensembl_gff_mcols | Man page |
| ensembl_gtf_mcols | Man page |
| ensembl_tx_biotypes | Man page |
| err0 | Source code |
| fill_cell_gene | Source code |
| filter_biotype | Source code |
| filter_biotype_gff3 | Source code |
| filter_chr | Source code |
| get_inflection | Man page Source code |
| get_intron_flanks | Man page Source code |
| get_knee_df | Man page Source code |
| get_velocity_files | Man page |
| get_velocity_files,EnsDb-method | Man page |
| get_velocity_files,GRanges-method | Man page |
| get_velocity_files,TxDb-method | Man page |
| get_velocity_files,character-method | Man page |
| knee_plot | Man page Source code |
| make_sparse_matrix | Man page Source code |
| match_style | Man page Source code |
| msg1 | Source code |
| msg2 | Source code |
| my_useMart | Source code |
| read_count_output | Man page Source code |
| read_velocity_output | Man page Source code |
| refseq_gff_mcols | Man page |
| save_tr2g_bustools | Man page Source code |
| sort_tr2g | Man page Source code |
| species2dataset | Man page Source code |
| standardize_tags | Man page Source code |
| sub_annot | Man page Source code |
| subset_annot | Man page |
| subset_annot,BSgenome-method | Man page |
| subset_annot,DNAStringSet-method | Man page |
| tr2g_EnsDb | Man page Source code |
| tr2g_GRanges | Man page Source code |
| tr2g_TxDb | Man page Source code |
| tr2g_ensembl | Man page Source code |
| tr2g_fasta | Man page Source code |
| tr2g_gff3 | Man page Source code |
| tr2g_gtf | Man page Source code |
| tr2g_junction | Man page Source code |
| transcript2gene | Man page Source code |
| unlist_rename | Source code |
| validate_velocity_input | Man page Source code |
| which_biotypes | Source code |
| write_tr2g_fun | Source code |
| write_velocity_output | Man page Source code |
