getEnrichedBPManual: Get all the BPs enriched (used to fill in the new structure...
In BarlierC/FunPart: Functional splitting based on functionally relevant set of genes
Description
Usage
Arguments
Value
Author(s)
View source: R/getEnrichedBPManual.R
Description
Get all the BPs enriched (used to fill in the new structure of FunPart object)
Usage
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getEnrichedBPManual(
dataset,
setGenes,
gda,
padjMeth = adjMethod,
padj = cutoff
)
Arguments
dataset
Initial single cell matrix (cells in columns, genes in rows)
setGenes
Enrichment ressource file
gda
Enrichment ressource file
padjMeth
P-adjusted correction method
padj
p-adjusted value cutoff
Value
vector of functional enrichment
Author(s)
Celine Barlier
BarlierC/FunPart documentation built on Dec. 17, 2021, 10:45 a.m.
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Description Usage Arguments Value Author(s)
View source: R/getEnrichedBPManual.R
Description
Get all the BPs enriched (used to fill in the new structure of FunPart object)
Usage
1 2 3 4 5 6 7 | getEnrichedBPManual(
dataset,
setGenes,
gda,
padjMeth = adjMethod,
padj = cutoff
)
|
Arguments
dataset |
Initial single cell matrix (cells in columns, genes in rows) |
setGenes |
Enrichment ressource file |
gda |
Enrichment ressource file |
padjMeth |
P-adjusted correction method |
padj |
p-adjusted value cutoff |
Value
vector of functional enrichment
Author(s)
Celine Barlier
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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