getEventIntensities: Compute and return individual event intensities from a...

In BenaroyaResearch/briDiscovr: Distribution analysis across clusters of a parent population overlaid with a rare subpopulation

Compute and return individual event intensities from a metaclustered experiment

Description

Compute and return individual event intensities from a metaclustered experiment

Usage

getEventIntensities(
  experiment,
  cellSubsets = NA,
  metaclusters = NA,
  subjects = NA,
  markers = NA
)

Arguments

experiment	A metaclustered discovrExperiment
cellSubsets	A string or vector of strings indicating which cell subsets to return event z-scores from
metaclusters	An integer or vector of integers indicating which metaclusters to return event z-scores from
subjects	A string or vector of strings indicating which subjects to return event z-scores from
markers	A string or vector of strings indicating which markers to return event z-scores from

Value

A data frame containing arcsinh-transformed event intensities from the events satisfying the requested filters. For any filter field without a specified value, all possible events will be returned.

Author(s)

Mario G Rosasco

BenaroyaResearch/briDiscovr documentation built on March 15, 2024, 12:31 a.m.