Files in BioAlvaro/MQmetrics
Quality Control of Protemics Data

.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
NEWS.md R/MQmetrics_import_functions.r R/MaxQuantAnalysisInfo.R R/PlotAcquisitionCycle.R R/PlotAllDynamicRange.R R/PlotAndromedaScore.R R/PlotCharge.R R/PlotCombinedDynamicRange.R R/PlotHydrophobicity.R R/PlotIntensity.R R/PlotIsotopePattern.R R/PlotMsMs.R R/PlotPCA.R R/PlotPTM.R R/PlotPTMAcrossSamples.R R/PlotPeaks.R R/PlotPeptidesIdentified.R R/PlotProteaseSpecificity.R R/PlotProteinCoverage.R R/PlotProteinOverlap.R R/PlotProteinPeptideRatio.R R/PlotProteinsIdentified.R R/PlotTotalIonCurrent.R R/PlotiRT.R R/PlotiRTScore.R R/ReportTables.R R/generateReport.R R/make_MQCombined.R README.md
inst/extdata/combined/proc/#runningTimes.txt
inst/extdata/combined/txt/evidence.txt
inst/extdata/combined/txt/modificationSpecificPeptides.txt
inst/extdata/combined/txt/msScans.txt
inst/extdata/combined/txt/msmsScans.txt
inst/extdata/combined/txt/parameters.txt
inst/extdata/combined/txt/peptides.txt
inst/extdata/combined/txt/proteinGroups.txt
inst/extdata/combined/txt/summary.txt
inst/extdata/mqpar.xml
inst/rmd/template_report.Rmd man/MaxQuantAnalysisInfo.Rd man/PlotAcquisitionCycle.Rd man/PlotAllDynamicRange.Rd man/PlotAndromedaScore.Rd man/PlotCharge.Rd man/PlotCombinedDynamicRange.Rd man/PlotHydrophobicity.Rd man/PlotIntensity.Rd man/PlotIsotopePattern.Rd man/PlotMsMs.Rd man/PlotPCA.Rd man/PlotPTM.Rd man/PlotPTMAcrossSamples.Rd man/PlotPeaks.Rd man/PlotPeptidesIdentified.Rd man/PlotProteaseSpecificity.Rd man/PlotProteinCoverage.Rd man/PlotProteinOverlap.Rd man/PlotProteinPeptideRatio.Rd man/PlotProteinsIdentified.Rd man/PlotTotalIonCurrent.Rd man/PlotiRT.Rd man/PlotiRTScore.Rd man/ReportTables.Rd
man/figures/README-example_long_names-1.png
man/generateReport.Rd man/make_MQCombined.Rd tests/testthat.R tests/testthat/test-MaxQuantAnalysisinfo.R tests/testthat/test-ReportTables.R tests/testthat/test-makeMQCombined.R
vignettes/.gitignore
vignettes/MQmetrics.Rmd
BioAlvaro/MQmetrics documentation built on Jan. 12, 2022, 3:02 p.m.