make_MQCombined: Read MaxQuant Tables From Directory
In BioAlvaro/MQmetrics: Quality Control of Protemics Data
Description
Usage
Arguments
Value
Examples
View source: R/make_MQCombined.R
Description
Read MaxQuant Tables From Directory
Usage
1
make_MQCombined(MQPathCombined, remove_contaminants = TRUE)
Arguments
MQPathCombined
The directory to the "combined" folder where the
MaxQuant results are stored.
remove_contaminants
Whether or not to remove contaminants,
reverse and identified by one one peptide.
Value
The files from the MaxQuant with the contaminants and Reverse
hits removed.
Examples
1
2
MQPathCombined <- system.file("extdata/combined/", package = "MQmetrics")
MQCombined <- make_MQCombined(MQPathCombined)
BioAlvaro/MQmetrics documentation built on Jan. 12, 2022, 3:02 p.m.
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Description Usage Arguments Value Examples
View source: R/make_MQCombined.R
Description
Read MaxQuant Tables From Directory
Usage
1 | make_MQCombined(MQPathCombined, remove_contaminants = TRUE)
|
Arguments
MQPathCombined |
The directory to the "combined" folder where the MaxQuant results are stored. |
remove_contaminants |
Whether or not to remove contaminants, reverse and identified by one one peptide. |
Value
The files from the MaxQuant with the contaminants and Reverse hits removed.
Examples
1 2 | MQPathCombined <- system.file("extdata/combined/", package = "MQmetrics")
MQCombined <- make_MQCombined(MQPathCombined)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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