PlotAllDynamicRange: Plots the dynamic range for all samples

Description Usage Arguments Value Examples

View source: R/PlotAllDynamicRange.R

Description

Plots the dynamic range for all samples

Usage

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PlotAllDynamicRange(MQCombined, show_shade = TRUE, percent_proteins = 0.9)

Arguments

MQCombined

Object list containing all the files from the MaxQuant output. It is the result from using make_MQCombined.

show_shade

Creates a shade showing where the percent_proteins are. Default is TRUE.

percent_proteins

Determines the percentage for the show_shade parameter. Default is 0.90 (90% of the proteins).

Value

Returns one plot for each sample, being the dynamic range.

Examples

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MQPathCombined <- system.file("extdata/combined/", package = "MQmetrics")
MQCombined <- make_MQCombined(MQPathCombined)
PlotAllDynamicRange(MQCombined)

BioAlvaro/MQviewer documentation built on Jan. 11, 2022, 8:25 p.m.