Bioconductor/HCAMatrixBrowser: Extract and manage matrix data from the Human Cell Atlas project

The HCAMatrixBrowser queries the HCA matrix endpoint to download expression data and returns a standard Bioconductor object. It uses the LoomExperiment package to serve matrix data that is downloaded as HDF5 loom format.

Getting started

Package details

Bioconductor views DataRepresentation Infrastructure
Maintainer
LicenseArtistic-2.0
Version0.0.8
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("Bioconductor/HCAMatrixBrowser")
Bioconductor/HCAMatrixBrowser documentation built on March 8, 2019, 5:57 a.m.