ShortRead-package: FASTQ input and manipulation.
In Bioconductor/ShortRead: FASTQ input and manipulation
ShortReadBase-package R Documentation
FASTQ input and manipulation.
Description
This package implements sampling, iteration, and input of FASTQ
files. The package includes functions for filtering and trimming
reads, and for generating a quality assessment report. Data are
represented as DNAStringSet-derived objects, and easily manipulated
for a diversity of purposes. The package also contains legacy support
for early single-end, ungapped alignment formats.
Details
See packageDescription('ShortRead')
Author(s)
Maintainer: Martin Morgan <mtmorgan@fhcrc.org>
Bioconductor/ShortRead documentation built on May 5, 2024, 4:14 a.m.
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| ShortReadBase-package | R Documentation |
FASTQ input and manipulation.
Description
This package implements sampling, iteration, and input of FASTQ files. The package includes functions for filtering and trimming reads, and for generating a quality assessment report. Data are represented as DNAStringSet-derived objects, and easily manipulated for a diversity of purposes. The package also contains legacy support for early single-end, ungapped alignment formats.
Details
See packageDescription('ShortRead')
Author(s)
Maintainer: Martin Morgan <mtmorgan@fhcrc.org>
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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