toDotR-methods: Methods for Function toDotR, using R to generate a dot...

In Bioconductor/graph: graph: A package to handle graph data structures

Methods for Function toDotR, using R to generate a dot serialization

Description

There are two basic methods of generating dot (http://www.graphviz.org) language serializations of R graph-class structures. First, using the toDot methods of the Rgraphviz package, the native graphviz agraph-associated methods can be employed to create the dot serialization. Second, with the methods described here, R functions can be used to perform the serialization directly from the graph data structure, without Rgraphviz.

Methods

G = "graphNEL", outDotFile = "character", renderList = "list", optList = "list"

create dot language descriptionof graph

G = "graphNEL", outDotFile = "character", renderList = "missing", optList = "missing"

create dot language descriptionof graph

G = "graphNEL", outDotFile = "character", renderList = "missing", optList = "list"

create dot language descriptionof graph

G = "graphNEL", outDotFile = "missing", renderList = "missing", optList = "missing"

create dot language descriptionof graph

G = "graphNEL", outDotFile = "missing", renderList = "missing", optList = "list"

create dot language descriptionof graph

G = "graphNEL", outDotFile = "missing", renderList = "character", optList = "missing"

create dot language descriptionof graph

G = "graphNEL", outDotFile = "missing", renderList = "list", optList = "list"

create dot language descriptionof graph

G = "graphNEL", outDotFile = "missing", renderList = "list", optList = "missing"

create dot language descriptionof graph

G = "compoundGraph", outDotFile = "character", renderList = "list", optList = "missing"

create dot language descriptionof graph

G = "compoundGraph", outDotFile = "character", renderList = "list", optList = "list"

create dot language descriptionof graph

G = "compoundGraph", outDotFile = "missing", renderList = "list", optList = "missing"

create dot language descriptionof graph

See Also

toDot-methods

Examples

example(randomGraph)
tmp <- tempfile()
toDotR( g1, tmp )
readLines(tmp)
unlink(tmp)

Bioconductor/graph documentation built on April 19, 2024, 9:32 a.m.