TCGAquery_MatchedCoupledSampleTypes: Retrieve multiple tissue types from the same patients.

In BioinformaticsFMRP/TCGAbiolinks: TCGAbiolinks: An R/Bioconductor package for integrative analysis with GDC data

Retrieve multiple tissue types from the same patients.

Description

TCGAquery_MatchedCoupledSampleTypes

Usage

TCGAquery_MatchedCoupledSampleTypes(barcode, typesample)

Arguments

barcode	barcode
typesample	typesample

Value

a list of samples / barcode filtered by type sample selected

Examples

 TCGAquery_MatchedCoupledSampleTypes(c("TCGA-B0-4698-01Z-00-DX1",
                             "TCGA-B0-4698-02Z-00-DX1"),
                             c("TP","TR"))
 barcode <- c("TARGET-20-PANSBH-02A-02D","TARGET-20-PANSBH-01A-02D",
              "TCGA-B0-4698-01Z-00-DX1","TCGA-CZ-4863-02Z-00-DX1",
              "TARGET-20-PANSZZ-02A-02D","TARGET-20-PANSZZ-11A-02D",
              "TCGA-B0-4699-01Z-00-DX1","TCGA-B0-4699-02Z-00-DX1"
              )
  TCGAquery_MatchedCoupledSampleTypes(barcode,c("TR","TP"))

BioinformaticsFMRP/TCGAbiolinks documentation built on April 12, 2024, 2:08 a.m.