Man pages for Burke-Lauenroth-Lab/rSOILWAT2
An Ecohydrological Ecosystem-Scale Water Balance Simulation Model

check_contentCheck availability of content in registered weather database
dbW_addScenariosAdds new Scenarios to a registered weather database
dbW_addSitesAdds new sites to a registered weather database
dbW_addWeatherDataAdds daily weather data to a registered weather database
dbW_blob_to_weatherDataConversion: (Compressed) raw vector (e.g., SQL-retrieved...
dbW_check_versionCheck that version of registered weather database is...
dbW_compressionQuery compression type of registered weather database
dbW_createDatabaseCreate a weather database
dbW_dataframe_to_monthlyConversion: object of daily weather data.frame to matrix of...
dbW_dataframe_to_weatherDataConversion: data.frame to object of class 'swWeatherData'
dbW_deleteSiteDelete a site and all associated weather data from a...
dbW_deleteSiteDataDelete a weather data record from a registered weather...
dbW_disconnectConnectionDisconnects a SQLite weather database from the package
dbW_getIDsLocate keys for weather database tables in the registered...
dbW_getScenarioIdExtract table keys to connect scenario(s) with weather data...
dbW_getScenariosTableRead entire table of Scenarios from the registered weather...
dbW_getSiteIdExtract table keys to connect sites with weather data in the...
dbW_getSiteTableRead entire table of sites from the registered weather...
dbW_getWeatherDataExtracts daily weather data from a registered weather...
dbW_IsValidCheck whether registered weather database connection is valid
dbW_setConnectionRegisters/connects a SQLite weather database with the package
dbW_updateSitesUpdates existing sites or adds new sites to a registered...
dbW_upgradeWeather database upgrade functions
dbW_versionQuery version number of registered weather database
dbW_weatherData_to_blobConversion: R object to (compressed) SQL-blob-ready character...
dbW_weatherData_to_dataframeConvert an object of class 'swWeatherData' to a data.frame
dbW_weatherData_to_monthlyConversion: object of class 'swWeatherData' to matrix of...
dbW_weather_to_SOILWATfilesConversion: object of class 'swWeatherData' or data.frame to...
get_Markov'get_Markov'
get_swCarbon'get_swCarbon'
get_swCloud'get_swCloud'
get_swEstab'get_swEstab'
get_swFiles'get_swFiles'
get_swOUT'get_swOUT'
get_swProd'get_swProd'
get_swSite'get_swSite'
get_swSoils'get_swSoils'
get_swSWC'get_swSWC'
get_swWeather'get_swWeather'
get_swWeatherData'get_swWeatherData'
get_swYears'get_swYears'
getWeatherData_foldersReads daily weather data from files
get_WeatherHistory'get_WeatherHistory'
get_years_from_weatherDataexport
get_years_from_weatherDFAssign years to weather data.frame
has_soilTemp_failedCheck if soil temperature simulation failed
rSOILWAT2Package 'rSOILWAT2': summary information
set_Markov'set_Markov' Need to define and export this generic method -...
set_Markov-set'set_Markov<-'
set_requested_flagsAssign requested values to (scalar) input flags
set_swCarbon'set_swCarbon' Need to define and export this generic method...
set_swCarbon-set'set_swCarbon<-'
set_swCloud'set_swCloud' Need to define and export this generic method -...
set_swCloud-set'set_swCloud<-'
set_swEstab-set'set_swEstab<-'
set_swFiles'set_swFiles' Need to define and export this generic method -...
set_swFiles-set'set_swFiles<-'
set_swOUT'set_swOUT' Need to define and export this generic method -...
set_swOUT-set'set_swOUT<-'
set_swProd'set_swProd' Need to define and export this generic method -...
set_swProd-set'set_swProd<-'
set_swSite'set_swSite' Need to define and export this generic method -...
set_swSite-set'set_swSite<-'
set_swSoils'set_swSoils' Need to define and export this generic method -...
set_swSoils-set'set_swSoils<-'
set_swSWC'set_swSWC' Need to define and export this generic method -...
set_swSWC-set'set_swSWC<-'
set_swWeather'set_swWeather' Need to define and export this generic method...
set_swWeatherData'set_swWeatherData' Need to define and export this generic...
set_swWeatherData-set'set_swWeatherData<-'
set_swWeather-set'set_swWeather<-'
set_swYears'set_swYears' Need to define and export this generic method -...
set_swYears-set'set_swYears<-'
set_WeatherHistory'set_WeatherHistory' Need to define and export this generic...
set_WeatherHistory-set'set_WeatherHistory<-'
swCarbon-classClass '"swCarbon"'
swCarbon_CO2ppm'swCarbon_CO2ppm'
swCarbon_CO2ppm-set'swCarbon_CO2ppm<-'
swCarbon_DeltaYear'swCarbon_DeltaYear'
swCarbon_DeltaYear-set'swCarbon_DeltaYear<-'
swCarbon_Scenario'swCarbon_Scenario'
swCarbon_Scenario-set'swCarbon_Scenario<-'
swCarbon_Use_Bio'swCarbon_Use_Bio'
swCarbon_Use_Bio-set'swCarbon_Use_Bio<-'
swCarbon_Use_WUE'swCarbon_Use_WUE'
swCarbon_Use_WUE-set'swCarbon_Use_WUE<-'
swCloud-classClass '"swCloud"'
swCloud_Humidity'swCloud_Humidity'
swCloud_Humidity-set'swCloud_Humidity<-'
swCloud_SkyCover'swCloud_SkyCover'
swCloud_SkyCover-set'swCloud_SkyCover<-'
swCloud_SnowDensity'swCloud_SnowDensity'
swCloud_SnowDensity-set'swCloud_SnowDensity<-'
swCloud_Transmissivity'swCloud_Transmissivity'
swCloud_Transmissivity-set'swCloud_Transmissivity<-'
swCloud_WindSpeed'swCloud_WindSpeed'
swCloud_WindSpeed-set'swCloud_WindSpeed<-'
swEstab-classClass '"swEstab"'
swEstabSpecies-classClass '"swEstabSpecies"'
swEstab_useEstab'swEstab_useEstab'
swEstab_useEstab-set'swEstab_useEstab<-'
sw_exampleDataInput data object for a site
sw_execExecute a 'rSOILWAT2' simulation run
swFiles_Carbon'swFiles_Carbon'
swFiles_Carbon-set'swFiles_Carbon<-'
swFiles-classClass '"swFiles"'
swFiles_Cloud'swFiles_Cloud'
swFiles_Cloud-set'swFiles_Cloud<-'
swFiles_Estab'swFiles_Estab'
swFiles_Estab-set'swFiles_Estab<-'
swFiles_filesIn'swFiles_filesIn'
swFiles_filesIn-set'swFiles_filesIn<-'
swFiles_LogFile'swFiles_LogFile'
swFiles_LogFile-set'swFiles_LogFile<-'
swFiles_MarkovCov'swFiles_MarkovCov'
swFiles_MarkovCov-set'swFiles_MarkovCov<-'
swFiles_MarkovProbs'swFiles_MarkovProbs'
swFiles_MarkovProbs-set'swFiles_MarkovProbs<-'
swFiles_Output'swFiles_Output'
swFiles_OutputPrefix'swFiles_OutputPrefix'
swFiles_OutputPrefix-set'swFiles_OutputPrefix<-'
swFiles_Output-set'swFiles_Output<-'
swFiles_Prod'swFiles_Prod'
swFiles_Prod-set'swFiles_Prod<-'
swFiles_ProjDir'swFiles_ProjDir'
swFiles_ProjDir-set'swFiles_ProjDir<-'
swFiles_SiteParams'swFiles_SiteParams'
swFiles_SiteParams-set'swFiles_SiteParams<-'
swFiles_Soils'swFiles_Soils'
swFiles_Soils-set'swFiles_Soils<-'
swFiles_SWCsetup'swFiles_SWCsetup'
swFiles_SWCsetup-set'swFiles_SWCsetup<-'
swFiles_WeatherPrefix'swFiles_WeatherPrefix'
swFiles_WeatherPrefix-set'swFiles_WeatherPrefix<-'
swFiles_WeatherSetup'swFiles_WeatherSetup'
swFiles_WeatherSetup-set'swFiles_WeatherSetup<-'
swFiles_Years'swFiles_Years'
swFiles_Years-set'swFiles_Years<-'
sw_inputDataDefault input object for 'rSOILWAT2'. Use this as a template...
swInputData-classClass '"swInputData"'
sw_inputDataFromFilesRead simulation input data from files on disk
swLog-classClass '"swLog"'
swLog_setLine-set'swLog_setLine<-'
swMarkov-classClass '"swMarkov"'
swMarkov_Conv'swMarkov_Conv'
swMarkov_Conv-set'swMarkov_Conv<-'
swMarkov_Prob'swMarkov_Prob'
swMarkov_Prob-set'swMarkov_Prob<-'
swMonthlyScalingParams-classClass '"swMonthlyScalingParams"'
swOUT-classClass 'swOUT'
sw_out_flagsSlot names of swOutput
swOUT_key-classClass '"swOUT_key"'
swOUT_OutputSeparator'swOUT_OutputSeparator'
swOUT_OutputSeparator-set'swOUT_OutputSeparator<-'
swOutput-classClass '"swOutput"'
sw_outputDataReturn output data
swOutput_getKEY'swOutput_getKEY'
swOutput_KEY-classClass '"swOutput_KEY"'
swOutput_KEY_Columns'swOutput_KEY_Columns'
swOutput_KEY_Columns-set'swOutput_KEY_Columns<-'
swOutput_KEY_Period'swOutput_KEY_Period'
swOutput_KEY_Period-set'swOutput_KEY_Period<-'
swOutput_KEY_TimeStep'swOutput_KEY_TimeStep'
swOutput_KEY_TimeStep-set'swOutput_KEY_TimeStep<-'
swOutput_setKEY-set'swOutput_setKEY<-'
swOUT_TimeStep'swOUT_TimeStep'
swOUT_TimeStep-set'swOUT_TimeStep<-'
swOUT_TimeStepsForEveryKey'swOUT_TimeStepsForEveryKey' Need to define and export this...
swOUT_TimeStepsForEveryKey-set'swOUT_TimeStepsForEveryKey<-'
swProd_Albedo'swProd_Albedo'
swProd_Albedo-set'swProd_Albedo<-'
swProd_CanopyHeight'swProd_CanopyHeight'
swProd_CanopyHeight-set'swProd_CanopyHeight<-'
swProd-classClass '"swProd"'
swProd_CO2Coefficients'swProd_CO2Coefficients'
swProd_CO2Coefficients-set'swProd_CO2Coefficients<-'
swProd_Composition'swProd_Composition'
swProd_Composition-set'swProd_Composition<-'
swProd_Cover_stcr'swProd_Cover_stcr'
swProd_Cover_stcr-set'swProd_Cover_stcr<-'
swProd_CritSoilWaterPotential'swProd_CritSoilWaterPotential'
swProd_CritSoilWaterPotential-set'swProd_CritSoilWaterPotential<-'
swProd_Es_param_limit'swProd_Es_param_limit'
swProd_Es_param_limit-set'swProd_Es_param_limit<-'
swProd_EsTpartitioning_param'swProd_EsTpartitioning_param'
swProd_EsTpartitioning_param-set'swProd_EsTpartitioning_param<-'
swProd_HydrRedstro'swProd_HydrRedstro'
swProd_HydrRedstro-set'swProd_HydrRedstro<-'
swProd_HydrRedstro_use'swProd_HydrRedstro_use'
swProd_HydrRedstro_use-set'swProd_HydrRedstro_use<-'
swProd_LitterInterParam'swProd_LitterInterParam'
swProd_LitterInterParam-set'swProd_LitterInterParam<-'
swProd_MonProd_forb'swProd_MonProd_forb'
swProd_MonProd_forb-set'swProd_MonProd_forb<-'
swProd_MonProd_grass'swProd_MonProd_grass'
swProd_MonProd_grass-set'swProd_MonProd_grass<-'
swProd_MonProd_shrub'swProd_MonProd_shrub'
swProd_MonProd_shrub-set'swProd_MonProd_shrub<-'
swProd_MonProd_tree'swProd_MonProd_tree'
swProd_MonProd_tree-set'swProd_MonProd_tree<-'
swProd_MonProd_veg'swProd_MonProd_veg'
swProd_MonProd_veg-set'swProd_MonProd_veg<-'
swProd_Shade'swProd_Shade'
swProd_Shade-set'swProd_Shade<-'
swProd_VegInterParam'swProd_VegInterParam'
swProd_VegInterParam-set'swProd_VegInterParam<-'
swReadLines'swReadLines'
swSite-classClass '"swSite"'
swSite_DrainageCoefficient'swSite_DrainageCoefficient'
swSite_DrainageCoefficient-set'swSite_DrainageCoefficient<-'
swSite_EvapCoefficients'swSite_EvapCoefficients'
swSite_EvapCoefficients-set'swSite_EvapCoefficients<-'
swSite_IntrinsicSiteParams'swSite_IntrinsicSiteParams'
swSite_IntrinsicSiteParams-set'swSite_IntrinsicSiteParams<-'
swSite_ModelCoefficients'swSite_ModelCoefficients'
swSite_ModelCoefficients-set'swSite_ModelCoefficients<-'
swSite_ModelFlags'swSite_ModelFlags'
swSite_ModelFlags-set'swSite_ModelFlags<-'
swSite_SnowSimulationParams'swSite_SnowSimulationParams'
swSite_SnowSimulationParams-set'swSite_SnowSimulationParams<-'
swSite_SoilTemperatureConsts'swSite_SoilTemperatureConsts'
swSite_SoilTemperatureConsts-set'swSite_SoilTemperatureConsts<-'
swSite_SoilTemperatureFlag'swSite_SoilTemperatureFlag'
swSite_SoilTemperatureFlag-set'swSite_SoilTemperatureFlag<-'
swSite_SWClimits'swSite_SWClimits'
swSite_SWClimits-set'swSite_SWClimits<-'
swSite_TranspCoefficients'swSite_TranspCoefficients'
swSite_TranspCoefficients-set'swSite_TranspCoefficients<-'
swSite_TranspirationRegions'swSite_TranspirationRegions'
swSite_TranspirationRegions-set'swSite_TranspirationRegions<-'
swSoils-classClass '"swSoils"'
swSoils_Layers'swSoils_Layers'
swSoils_Layers-set'swSoils_Layers<-'
swSWC-classClass '"swSWC"'
swSWC_FirstYear'swSWC_FirstYear'
swSWC_FirstYear-set'swSWC_FirstYear<-'
swSWC_hist-classClass '"swSWC_hist"'
swSWC_HistoricData'swSWC_HistoricData'
swSWC_HistoricData-set'swSWC_HistoricData<-'
swSWC_HistoricList'swSWC_HistoricList'
swSWC_HistoricList-set'swSWC_HistoricList<-'
swSWC_Method'swSWC_Method'
swSWC_Method-set'swSWC_Method<-'
swSWC_prefix'swSWC_prefix'
swSWC_prefix-set'swSWC_prefix<-'
swSWC_use'swSWC_use'
swSWC_use-set'swSWC_use<-'
swWeather-classClass '"swWeather"'
swWeatherData-classClass '"swWeatherData"'
swWeather_DaysRunningAverage'swWeather_DaysRunningAverage'
swWeather_DaysRunningAverage-set'swWeather_DaysRunningAverage<-'
swWeather_FirstYearHistorical'swWeather_FirstYearHistorical'
swWeather_FirstYearHistorical-set'swWeather_FirstYearHistorical<-'
swWeather_MonScalingParams'swWeather_MonScalingParams'
swWeather_MonScalingParams-set'swWeather_MonScalingParams<-'
swWeather_pct_SnowDrift'swWeather_pct_SnowDrift'
swWeather_pct_SnowDrift-set'swWeather_pct_SnowDrift<-'
swWeather_pct_SnowRunoff'swWeather_pct_SnowRunoff'
swWeather_pct_SnowRunoff-set'swWeather_pct_SnowRunoff<-'
swWeather_UseMarkov'swWeather_UseMarkov'
swWeather_UseMarkov-set'swWeather_UseMarkov<-'
swWeather_UseSnow'swWeather_UseSnow'
swWeather_UseSnow-set'swWeather_UseSnow<-'
swYears-classClass '"swYears"'
swYears_EDOEY'swYears_EDOEY'
swYears_EDOEY-set'swYears_EDOEY<-'
swYears_EndYear'swYears_EndYear'
swYears_EndYear-set'swYears_EndYear<-'
swYears_FDOFY'swYears_FDOFY'
swYears_FDOFY-set'swYears_FDOFY<-'
swYears_isNorth'swYears_isNorth'
swYears_isNorth-set'swYears_isNorth<-'
swYears_StartYear'swYears_StartYear'
swYears_StartYear-set'swYears_StartYear<-'
weatherDataDaily weather data for a site
Burke-Lauenroth-Lab/rSOILWAT2 documentation built on March 1, 2019, 11:23 p.m.