maftools_get_transcript_refseq: Get Longest Transcript Refseq ID
In CCICB/CRUX: Easily explore patterns of somatic variation in cancer using 'CRUX'
View source: R/fct_external_tools_load_dataframe.R
maftools_get_transcript_refseq R Documentation
Get Longest Transcript Refseq ID
Description
Returns the transcript id from the 'Transcript_ID' column of a maf_df.
If no Transcript_ID column is found, will return the longest refseq transcript for each gene name.
Usage
maftools_get_transcript_refseq(maf_df)
Arguments
maf_df
(HGNC ID of gene)
Value
vector of the same length as maf_df containing transcript refseq ids (character)
CCICB/CRUX documentation built on Jan. 28, 2024, 10:12 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
View source: R/fct_external_tools_load_dataframe.R
| maftools_get_transcript_refseq | R Documentation |
Get Longest Transcript Refseq ID
Description
Returns the transcript id from the 'Transcript_ID' column of a maf_df. If no Transcript_ID column is found, will return the longest refseq transcript for each gene name.
Usage
maftools_get_transcript_refseq(maf_df)
Arguments
maf_df |
(HGNC ID of gene) |
Value
vector of the same length as maf_df containing transcript refseq ids (character)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.