mod_plot_survival_server: plot_survival Server Functions

In CCICB/CRUX: Easily explore patterns of somatic variation in cancer using 'CRUX'

plot_survival Server Functions

Description

plot_survival Server Functions

Usage

mod_plot_survival_server(id, maf, geneset, time, status, or, is_tcga)

Arguments

id	Internal parameters for shiny.
maf	MAF object, usually produced by maftools::read_maf (reactive MAF object)
geneset	character vector where each element is the hugo_symbol of a gene. (reactive character vector)
time	name of column in clinical data describing time to event (reactive string)
status	name of column in clinical data describing event status (reactive string)
or	should samples be classified as mutant if ANY gene in geneset is mutated (default is ALL must be mutated) (reactive flag)
is_tcga	is sample from TCGA? (flag)

CCICB/CRUX documentation built on Jan. 28, 2024, 10:12 p.m.