addSJDtoSeurat: Add SJD loadings to a Seurat object
In CHuanSite/SJD: Structured Joint Decomposition (SJD)
View source: R/addSJDtoSeurat.R
addSJDtoSeurat R Documentation
Add SJD loadings to a Seurat object
Description
Add SJD loadings to a Seurat object
Usage
addSJDtoSeurat(Seurat.obj, SJDoutput, Dataset, SJDloading, SJDmethod = NA)
Arguments
Seurat.obj
A Seurat Object.
SJDoutput
A SJD object of decomposition results.
Dataset
The name of the Dataset of interests in the SJD score_list component
SJDloading
The name of the SJDloading of interests in the SJD score_list component under Dataset.
SJDmethod
The name of the SJD method used for the decomposition, e.g. "twoStageLCA". If NA, will use "SJD"
CHuanSite/SJD documentation built on Nov. 29, 2024, 5:52 a.m.
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View source: R/addSJDtoSeurat.R
| addSJDtoSeurat | R Documentation |
Add SJD loadings to a Seurat object
Description
Add SJD loadings to a Seurat object
Usage
addSJDtoSeurat(Seurat.obj, SJDoutput, Dataset, SJDloading, SJDmethod = NA)
Arguments
Seurat.obj |
A Seurat Object. |
SJDoutput |
A SJD object of decomposition results. |
Dataset |
The name of the Dataset of interests in the SJD score_list component |
SJDloading |
The name of the SJDloading of interests in the SJD score_list component under Dataset. |
SJDmethod |
The name of the SJD method used for the decomposition, e.g. "twoStageLCA". If NA, will use "SJD" |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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