getLogLikMk: Compute the loglik for the model.

View source: R/getLogLikMk.R

getLogLikMkR Documentation

Compute the loglik for the model.

Description

Internal function to get the likelihood of the model.

Usage

getLogLikMk(phy, data, Q, root.type)

Arguments

phy

the phylogeny

data

the data matrix

Q

the transition matrix

root.type

the root type

Details

No details.

Value

Return the loglik for the model.

Author(s)

daniel


Caetanods/sequence-trait documentation built on Nov. 25, 2022, 4:32 p.m.