binarizeAndCombine: Binarize images and combine to a single binary image

In CeMOS-Mannheim/PlaquePicker: Single-object based analysis of MSI data

Binarize images and combine to a single binary image

Description

Binarize images and combine to a single binary image

Usage

binarizeAndCombine(
  im,
  method = c("tpoint", "geometric", "peak"),
  binMatrix = NULL,
  ...
)

Arguments

im	matrix or array representing a image or a stack of images
method	character, can be "tpoint", "geometric", "peak"
binMatrix	matrix, a binary matrix. Overwrites method and uses this matrix to binarize the data.

Value

matrix with binary image

CeMOS-Mannheim/PlaquePicker documentation built on Sept. 30, 2022, 5:54 a.m.