tpoint: T-Point thresholding

In CeMOS-Mannheim/PlaquePicker: Single-object based analysis of MSI data

T-Point thresholding

Description

implemation described in Coudray et. al. 2010, see https://www.sciencedirect.com/science/article/pii/S0167865509003675?via

Usage

tpoint(ints, breaks = 500, diagnosis = FALSE, plot = FALSE)

Arguments

ints	numeric vector of intensities.
breaks	numeric, number of bins in histogram.
diagnosis	logical, return set of internal values additional to threshold
plot	logical, show plot for diagnosis.

Value

numeric threshold.

Examples

thresh <- tpoint(as.vector(NLGF67w_mouse1_rep1[,,1]))

CeMOS-Mannheim/PlaquePicker documentation built on Sept. 30, 2022, 5:54 a.m.