callInternalCoGAPS: make correct call to internal CoGAPS dispatch function,...

In CoGAPS/CoGAPS: Coordinated Gene Activity in Pattern Sets

make correct call to internal CoGAPS dispatch function, CoGAPS could be called directly, but to avoid any re-entrant behavior this function is called instead. It is a light wrapper around cogaps_cpp that handles setting the distributed parameters

Description

make correct call to internal CoGAPS dispatch function, CoGAPS could be called directly, but to avoid any re-entrant behavior this function is called instead. It is a light wrapper around cogaps_cpp that handles setting the distributed parameters

Usage

callInternalCoGAPS(data, allParams, uncertainty, subsetIndices, workerID)

Arguments

data	data in a supported format
allParams	list of all parameters
uncertainty	uncertainty of data in the same format
index	index for which subset to run on
sets	list of all subsets
geneNames	names of all genes
sampleNames	names of all samples
fixedMatrix	matrix of matched patterns

Value

CogapsResult object

CoGAPS/CoGAPS documentation built on June 23, 2024, 5:19 p.m.