callInternalCoGAPS: make correct call to internal CoGAPS dispatch function,...

View source: R/DistributedCogaps.R

callInternalCoGAPSR Documentation

make correct call to internal CoGAPS dispatch function, CoGAPS could be called directly, but to avoid any re-entrant behavior this function is called instead. It is a light wrapper around cogaps_cpp that handles setting the distributed parameters

Description

make correct call to internal CoGAPS dispatch function, CoGAPS could be called directly, but to avoid any re-entrant behavior this function is called instead. It is a light wrapper around cogaps_cpp that handles setting the distributed parameters

Usage

callInternalCoGAPS(data, allParams, uncertainty, subsetIndices, workerID)

Arguments

data

data in a supported format

allParams

list of all parameters

uncertainty

uncertainty of data in the same format

index

index for which subset to run on

sets

list of all subsets

geneNames

names of all genes

sampleNames

names of all samples

fixedMatrix

matrix of matched patterns

Value

CogapsResult object


CoGAPS/CoGAPS documentation built on June 23, 2024, 5:19 p.m.