GSEA_more: GSEA_more

In ConesaLab/MORE: Multi-Omics REgulation (MORE)

GSEA_more

Description

GSEA_more Function to be applied to RegulationInCondition function output.

Usage

GSEA_more(
  output_globregincond,
  output_globregincond2 = NULL,
  annotation,
  alpha = 0.05,
  p.adjust.method = "fdr"
)

Arguments

output_globregincond	Output object of running RegulationInCondition function
output_globregincond2	Output object of running RegulationInCondition function for other group different to the previous. By default, NULL.
annotation	Annotation matrix with genes in the first column, GO terms in the second
alpha	The adjusted pvalue cutoff to consider
p.adjust.method	One of holm, hochberg, hommel, bonferroni, BH, BY, fdr or none

Value

Plot of the network induced from more.

ConesaLab/MORE documentation built on March 7, 2024, 6:44 p.m.