ORA_more: ORA_more

View source: R/output_analysis.R

ORA_moreR Documentation

ORA_more

Description

ORA_more Function to be applied to RegulationInCondition function output.

Usage

ORA_more(
  output,
  output_globregincond,
  annotation,
  alpha = 0.05,
  p.adjust.method = "fdr"
)

Arguments

output

Output object of running more

output_globregincond

Output object of running RegulationInCondition function

annotation

Annotation matrix with genes in the first column, GO terms in the second

alpha

The adjusted pvalue cutoff to consider

p.adjust.method

One of holm, hochberg, hommel, bonferroni, BH, BY, fdr or none

Value

Plot of the network induced from more.


ConesaLab/MORE documentation built on March 7, 2024, 6:44 p.m.