Files in CostaLab/MOJITOO

MOJITOO: (M)ulti-m(O)dal (J)oint (I)ntegra(T)ion of c(O)mp(O)nents

.gitignore

DESCRIPTION

NAMESPACE

R/CCA.R R/RcppExports.R R/consensus_nmf.R R/generics.R R/mcla.R R/mojitoo.R R/tools.R R/util.R R/viz.R README.md

_pkgdown.yml

docs/404.html

docs/articles/ArchRObject_integration.html

docs/articles/ArchRObject_integration_files/figure-html/UMAP-1.png

docs/articles/SeuratObject_integration.html

docs/articles/SeuratObject_integration_files/figure-html/CCDimPlot-1.png

docs/articles/SeuratObject_integration_files/figure-html/CCHeatmap-1.png

docs/articles/SeuratObject_integration_files/figure-html/CCHeatmap-2.png

docs/articles/SeuratObject_integration_files/figure-html/CCTracks-1.png

docs/articles/SeuratObject_integration_files/figure-html/UMAPPlot-1.png

docs/articles/index.html

docs/authors.html

docs/deps/bootstrap-5.1.0/bootstrap.bundle.min.js

docs/deps/bootstrap-5.1.0/bootstrap.bundle.min.js.map

docs/deps/bootstrap-5.1.0/bootstrap.min.css

docs/deps/data-deps.txt

docs/deps/jquery-3.6.0/jquery-3.6.0.js

docs/deps/jquery-3.6.0/jquery-3.6.0.min.js

docs/deps/jquery-3.6.0/jquery-3.6.0.min.map

docs/index.html

docs/link.svg

docs/pkgdown.js

docs/pkgdown.yml

docs/reference/ATACTrack.Seurat.html

docs/reference/ATACTrack.html

docs/reference/CCA.html

docs/reference/ConsensusNMF.html

docs/reference/GeneCCDimPlot.html

docs/reference/GeneCCHeatmap.Seurat.html

docs/reference/MOJITOO-package.html

docs/reference/Rplot001.png

docs/reference/dot-CCbyGenes.ArchRProject.html

docs/reference/dot-CCbyGenes.Seurat.html

docs/reference/dot-CCbyGenes.html

docs/reference/dot-CCbyPeaks.ArchRProject.html

docs/reference/dot-CCbyPeaks.Seurat.html

docs/reference/dot-CCbyPeaks.html

docs/reference/dot-addMojitooAssay.ArchRProject.html

docs/reference/dot-addMojitooAssay.Seurat.html

docs/reference/dot-addMojitooAssay.html

docs/reference/getCellCol.html

docs/reference/getDimRed.html

docs/reference/getMatrix.html

docs/reference/index.html

docs/reference/install.pymetis.html

docs/reference/mojitoo.ArchRProject.html

docs/reference/mojitoo.html

docs/reference/setCellCol.html

docs/reference/setDimRed.html

docs/reference/setMatrix.html

docs/search.json

docs/sitemap.xml

inst/figures/LOGO.png

man/ATACTrack.Rd man/ATACTrack.Seurat.Rd man/CCA.Rd man/ConsensusNMF.Rd man/GeneCCDimPlot.Rd man/GeneCCHeatmap.Seurat.Rd man/MOJITOO-package.Rd man/dot-CCbyGenes.ArchRProject.Rd man/dot-CCbyGenes.Rd man/dot-CCbyGenes.Seurat.Rd man/dot-CCbyPeaks.ArchRProject.Rd man/dot-CCbyPeaks.Rd man/dot-CCbyPeaks.Seurat.Rd man/dot-addMojitooAssay.ArchRProject.Rd man/dot-addMojitooAssay.Rd man/dot-addMojitooAssay.Seurat.Rd man/getCellCol.Rd man/getDimRed.Rd man/getMatrix.Rd man/install.pymetis.Rd man/mojitoo.ArchRProject.Rd man/mojitoo.Rd man/setCellCol.Rd man/setDimRed.Rd man/setMatrix.Rd

pymojitoo/.gitignore

pymojitoo/README.md

pymojitoo/mojitoo/__init__.py

pymojitoo/mojitoo/core.py

pymojitoo/setup.py

src/.gitignore

src/RcppExports.cpp

src/nmf.cpp

vignettes/ArchRObject_integration.Rmd vignettes/SeuratObject_integration.Rmd

CostaLab/MOJITOO documentation built on Oct. 17, 2023, 12:06 a.m.