dot-CCbyGenes.ArchRProject: .CCbyGenes.ArchRProject function

In CostaLab/MOJITOO: MOJITOO: (M)ulti-m(O)dal (J)oint (I)ntegra(T)ion of c(O)mp(O)nents

.CCbyGenes.ArchRProject function

Description

Top positive&negative peaks of CCs

Usage

## S3 method for class 'ArchRProject'
.CCbyGenes(
  object,
  CCs = 1:3,
  topN = 10,
  RNA.assay = "RNA",
  MOJITOO.reduction = "MOJITOO",
  filter.mito = T,
  filter.ribo = T
)

Arguments

object	ArchRProject object
CCs	CC vector which CCs
topN	topn genes to plot
RNA.assay	RNA assay name
MOJITOO.reduction	mojitoo reduction name
filter.mito	bool if filter mitochondria of genes
filter.ribo	bool if filter ribosome of genes

Examples

.CCbyGenes()

CostaLab/MOJITOO documentation built on Oct. 28, 2024, 10:42 a.m.