API for CostaLab/scMarkerDetect
Detect marker panel from scRNA-seq profile
| Global functions | |
|---|---|
| Detect_combine_markers | Source code |
| Detect_single_marker | Man page Source code |
| Detect_single_marker_all | Man page |
| firstup | Man page Source code |
| generate_report | Man page Source code |
| generate_report_rmd | Man page Source code |
| get_PRAUC_matrix_combine_markers | Source code |
| get_PRAUC_matrix_combine_markers_neg | Source code |
| get_PRAUC_matrix_combine_markers_neg_pos | Source code |
| get_antibody | Man page Source code |
| get_gene_score | Man page |
| get_gene_score_neg | Man page Source code |
| get_gene_score_neg.fbeta | Man page Source code |
| get_gene_score_pos | Man page Source code |
| get_gene_score_pos.fbeta | Man page Source code |
| get_original_alpha | Man page Source code |
| get_split_neg | Source code |
| get_split_neg_neg | Source code |
| get_split_neg_tp | Source code |
| get_split_pos | Source code |
| get_split_pos_neg | Source code |
| get_split_pos_pos | Man page Source code |
| get_split_pos_tp | Source code |
| intersect.ignorecase | Man page Source code |
| makeid | Man page Source code |
| normalize | Man page Source code |
| plot_combine_PRAUC | Source code |
| plot_filter_combination_first2 | Source code |
| plot_filter_stepbystep_first2 | Man page Source code |
| plot_ridge | Man page Source code |
