group_transcripts: Group transcripts

Description Usage Arguments Value

View source: R/transcript_processing.R

Description

Creates groups of transcripts on the same strand based on proximity. The groups are constructed of connected transcripts such that a pair of transcripts are considered connected if they are within a given distance d of each other. The group then consists of all transcripts that are connected to at least one other member.

Usage

1
group_transcripts(transcript_granges, distance = 0)

Arguments

transcript_granges

GRanges-class object

distance

the distance within which two transcripts are considered connected

Value

A GenomicRangesList-class object


CshlSiepelLab/nascentRNASim documentation built on Dec. 17, 2021, 3:08 p.m.